debian specific patch information for gromacs / 4.0.7-3

 configure.ac |    4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

 configure.ac |   21 +++++++++++++++------
 1 file changed, 15 insertions(+), 6 deletions(-)

 configure.ac |    1 +
 1 file changed, 1 insertion(+)

 README |   13 ++++++++++++-
 1 file changed, 12 insertions(+), 1 deletion(-)

 src/gmxlib/nonbonded/nb_kernel_ppc_altivec/nb_kernel_ppc_altivec.h |    7 +++++++
 src/gmxlib/nonbonded/nb_kernel_ppc_altivec/ppc_altivec_util.h      |    7 +++++++
 2 files changed, 14 insertions(+)

 include/vsite.h         |   18 +--
 share/html/online.html  |    8 +
 src/gmxlib/Makefile.am  |   26 +++-
 src/gmxlib/copyrite.c   |    5 
 src/gmxlib/mshift.c     |   11 +
 src/gmxlib/mvdata.c     |    4 
 src/gmxlib/trxio.c      |    6 +
 src/kernel/mdrun.c      |    3 
 src/kernel/readir.c     |   32 ++---
 src/mdlib/edsam.c       |   21 ++-
 src/mdlib/init.c        |    6 -
 src/mdlib/minimize.c    |   30 +++--
 src/mdlib/partdec.c     |  254 ++++++++++++++++++++++---------------------
 src/mdlib/sim_util.c    |    3 
 src/mdlib/vsite.c       |  283 ++++++++++++++++++------------------------------
 src/tools/do_dssp.c     |    2 
 src/tools/gmx_cluster.c |    4 
 src/tools/gmx_rdf.c     |   21 +++
 src/tools/gmx_trjconv.c |   13 +-
 src/tools/gmx_wham.c    |    2 
 src/tools/make_edi.c    |    1 
 21 files changed, 389 insertions(+), 364 deletions(-)