Index: gentle-1.9+20100602+dfsg/Makefile.am
===================================================================
--- gentle-1.9+20100602+dfsg.orig/Makefile.am	2010-06-05 16:36:41.000000000 +0200
+++ gentle-1.9+20100602+dfsg/Makefile.am	2010-06-05 16:36:41.000000000 +0200
@@ -137,24 +137,6 @@
 TPhyloTree.cpp\
 PCR_Troubleshoot.cpp\
 TProteolysis.cpp\
-clustalw/alnscore.cpp\
-clustalw/amenu.cpp\
-clustalw/calcgap.cpp\
-clustalw/calcprf1.cpp\
-clustalw/calcprf2.cpp\
-clustalw/calctree.cpp\
-clustalw/clustalw.cpp\
-clustalw/gcgcheck.cpp\
-clustalw/interfac.cpp\
-clustalw/malign.cpp\
-clustalw/palign.cpp\
-clustalw/prfalign.cpp\
-clustalw/random.cpp\
-clustalw/readmat.cpp\
-clustalw/sequence.cpp\
-clustalw/showpair.cpp\
-clustalw/trees.cpp\
-clustalw/util.cpp\
 ipc/element.cpp\
 ipc/gp_out.cpp\
 ipc/ipc.cpp\
@@ -231,12 +213,6 @@
 TPhyloTree.h\
 TEliteLaChromLogDialog.h\
 ncoils.h\
-clustalw/clustalw.h\
-clustalw/dayhoff.h \
-clustalw/general.h \
-clustalw/matrices.h \
-clustalw/param.h \
-clustalw/xmenu.h\
 ipc/element.h\
 ipc/global.h\
 ipc/gp_out.h\